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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1365786_1365868_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1365786 - 1365868

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CTGTCCTCACGT

Flanking Amino Acid:

QKPWAKKLKELETAKKAYHL

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

72.4

0.56

73.5

32.5

Major PPT

81.3

0.71

0.7

26.2

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

47.8

-0

2.1

67.53

Associated Gene:

Gene:

PACSIN1

Ensembl Gene ID:

ENSAPLG00000008350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039799

1364240 - 1367800

3561

ENSAPLT00000008678

1364240 - 1367995

3756