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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1366025_1366343_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1366025 - 1366343

Intron Length:

319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGAGCC

5'SS Class:

major

3'SS Sequence:

CTGCGCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

GCTGGTGTAACC

Flanking Amino Acid:

VEKCKQDVQKTQEKYEKVLD

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

63.2

35.6

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

72.9

0.52

0.9

65.3

36.1

Minor 5ss

25.2

-2.9

3.3

33.5

41.9

Minor BPS

-0.5

2.3

53.83

44.6

Associated Gene:

Gene:

PACSIN1

Ensembl Gene ID:

ENSAPLG00000008350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039799

1364240 - 1367800

3561

ENSAPLT00000008678

1364240 - 1367995

3756