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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1366520_1366787_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1366520 - 1366787

Intron Length:

268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTCCAT

U12 Branch Point Sequence:

AGCCCCCCACCC

Flanking Amino Acid:

KRHLNLAESSSYANVYRELE

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

47.8

-0.1

1.5

58.2

48.3

Major PPT

74.9

0.56

0.7

68.3

25.5

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

-0.7

48.37

40.8

Associated Gene:

Gene:

PACSIN1

Ensembl Gene ID:

ENSAPLG00000008350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039799

1364240 - 1367800

3561

ENSAPLT00000008678

1364240 - 1367995

3756