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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1366909_1366997_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1366909 - 1366997

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GGGTGCTGAGCG

Flanking Amino Acid:

GMAMNWPQFEEWNPDLTHTI

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

78.1

0.63

0.9

69.5

41.7

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

42.9

-0.6

2.1

46.01

45.9

Associated Gene:

Gene:

PACSIN1

Ensembl Gene ID:

ENSAPLG00000008350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008678

1364240 - 1367995

3756

ENSAPLT00000039799

1364240 - 1367800

3561