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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1367120_1367262_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1367120 - 1367262

Intron Length:

143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

AGTGCCCAAATC

Flanking Amino Acid:

ETGASAGERGSVSSHDRGQT

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

33.8

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

78.4

0.64

0.7

69.9

30.9

Minor 5ss

26.4

-2.7

3.5

38.5

46.7

Minor BPS

46.2

-0.3

58.03

Associated Gene:

Gene:

PACSIN1

Ensembl Gene ID:

ENSAPLG00000008350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039799

1364240 - 1367800

3561

ENSAPLT00000008678

1364240 - 1367995

3756