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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1400358_1404822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1400358 - 1404822

Intron Length:

4465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

AACTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATGTCTCCAACT

Flanking Amino Acid:

KLFGYQTVFVGFPRSLSLRT

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

78.6

37.2

Major BPS

73.8

0.59

0.9

26.8

Major PPT

80.8

0.69

0.8

77.6

35.8

Minor 5ss

33.5

-1.9

3.2

40.3

45.6

Minor BPS

54.3

0.21

1.9

75.45

41.2

Associated Gene:

Gene:

ILRUN

Ensembl Gene ID:

ENSAPLG00000019995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042887

1399113 - 1417628

18516