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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1400358_1407606_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1400358 - 1407606

Intron Length:

7249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCCGGTGT

5'SS Class:

major

3'SS Sequence:

AACTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATGTCTCCAACT

Flanking Amino Acid:

TEMRVVRATRGFPRSLSLRT

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.4

61.5

45.6

Major BPS

73.8

0.59

0.9

26.8

Major PPT

80.8

0.69

0.8

77.6

35.8

Minor 5ss

32.8

-2

3.4

47.9

47.6

Minor BPS

54.3

0.21

1.9

75.45

41.2

Associated Gene:

Gene:

ILRUN

Ensembl Gene ID:

ENSAPLG00000019995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041972

1399113 - 1417628

18516