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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1407767_1409339_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1407767 - 1409339

Intron Length:

1573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCACTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

TTTGTTTGCACT

Flanking Amino Acid:

NNLSVVTYSKVGTAQSCASE

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

0.7

0.9

74.3

35.4

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

49.3

0.03

75.64

41.7

Associated Gene:

Gene:

ILRUN

Ensembl Gene ID:

ENSAPLG00000019995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044769

1405820 - 1417628

11809

ENSAPLT00000041972

1399113 - 1417628

18516