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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1415943_1417572_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1415943 - 1417572

Intron Length:

1630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGTGTTAG

5'SS Class:

major

3'SS Sequence:

TTTTGCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

GTGTACTTAAGG

Flanking Amino Acid:

RLLPRGAQPCRNLQAAIGAY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

38.4

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

84.9

0.78

0.8

77.7

36.7

Minor 5ss

40.7

-1

2.7

47.2

Minor BPS

55.2

0.03

1.9

61.11

46.2

Associated Gene:

Gene:

ILRUN

Ensembl Gene ID:

ENSAPLG00000019995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042887

1399113 - 1417628

18516

ENSAPLT00000041972

1399113 - 1417628

18516

ENSAPLT00000044769

1405820 - 1417628

11809