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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1415994_1419113_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1415994 - 1419113

Intron Length:

3120

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCAGGCGCG

5'SS Class:

major

3'SS Sequence:

GACCTCTGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TACTCTTTAGGC

Flanking Amino Acid:

VVGVTPRGETGTRLTRVLKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.2

61.3

42.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

49.1

-0

1.1

48.6

38.1

Minor 5ss

24.5

-2.9

4.2

29.5

43.4

Minor BPS

52.3

0.05

1.9

62.96

42.9

Associated Gene:

Gene:

ILRUN

Ensembl Gene ID:

ENSAPLG00000019995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008392

1409307 - 1419160

9854