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Intron Name: Anas_platyrhynchos_platyrhynchos_27_143199_146426_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143199 - 146426

Intron Length:

3228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATGAT

U12 Branch Point Sequence:

GGGTCCATGATG

Flanking Amino Acid:

FPYLCQKNGGGAYLVPYLVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.3

Major BPS

59.7

0.24

1.2

51.3

42.7

Major PPT

68.3

0.41

0.9

61.1

35.1

Minor 5ss

26.7

-2.7

3.3

37.5

47.2

Minor BPS

49.5

-0.1

1.7

41.9

Associated Gene:

Gene:

SLC6A17

Ensembl Gene ID:

ENSAPLG00000015200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043647

142792 - 153819

11028

ENSAPLT00000015862

142792 - 153819

11028