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Intron Name: Anas_platyrhynchos_platyrhynchos_27_146585_146810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

146585 - 146810

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAC

U12 Branch Point Sequence:

TGCGACTTCACA

Flanking Amino Acid:

LGGIGYASCLVCFFVGLYYN

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

67.8

0.44

30.1

Major PPT

81.2

0.7

73.7

31.4

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

48.2

-0.1

2.1

60.7

45.1

Associated Gene:

Gene:

SLC6A17

Ensembl Gene ID:

ENSAPLG00000015200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043647

142792 - 153819

11028

ENSAPLT00000015862

142792 - 153819

11028