Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_1468513_1469229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1468513 - 1469229

Intron Length:

717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCATTC

5'SS Class:

major

3'SS Sequence:

TCTCTTCCCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CACTGCTTAACT

Flanking Amino Acid:

DVRLDGFRLKLNIPVEKKVT

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.2

67.1

39.7

Major BPS

0.87

0.8

85.6

Major PPT

77.2

0.61

0.7

72.8

25.6

Minor 5ss

-0.3

3.1

68.2

42.8

Minor BPS

65.3

0.56

1.8

76.7

45.7

Associated Gene:

Gene:

UHRF1BP1

Ensembl Gene ID:

ENSAPLG00000007589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007928

1445659 - 1476381

30723

ENSAPLT00000043634

1460921 - 1476381

15461