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Intron Name: Anas_platyrhynchos_platyrhynchos_27_149027_150082_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

149027 - 150082

Intron Length:

1056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAACC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCCACCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCAAAC

U12 Branch Point Sequence:

GTGTCCCCACCA

Flanking Amino Acid:

DGIMHMFTPKLDKMLDPQVW

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.6

Major BPS

48.4

-0.1

52.9

28.9

Major PPT

56.2

0.14

1.1

53.5

Minor 5ss

34.7

-1.7

2.9

44.4

43.1

Minor BPS

46.2

-0.2

2.1

61.32

44.3

Associated Gene:

Gene:

SLC6A17

Ensembl Gene ID:

ENSAPLG00000015200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043647

142792 - 153819

11028

ENSAPLT00000015862

142792 - 153819

11028