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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1498152_1515677_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1498152 - 1515677

Intron Length:

17526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCGT

5'SS Class:

major

3'SS Sequence:

TTCTGTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCTAA

U12 Branch Point Sequence:

GTATGCCTAAGT

Flanking Amino Acid:

SFSITAPGMSSIWRGPNVNC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

64.3

47.1

Major BPS

47.8

-0.1

1.3

44.4

40.4

Major PPT

85.9

0.81

0.8

80.6

31.5

Minor 5ss

-1.4

3.4

56.8

47.4

Minor BPS

47.3

-0.1

2.3

70.43

45.8

Associated Gene:

Gene:

ANKS1A

Ensembl Gene ID:

ENSAPLG00000006934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030894

1498003 - 1596566

98564

ENSAPLT00000028645

1498003 - 1594338

96336

ENSAPLT00000027925

1498003 - 1594338

96336

ENSAPLT00000007263

1498003 - 1596566

98564