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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1516686_1517737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1516686 - 1517737

Intron Length:

1052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGCGTA

5'SS Class:

major

3'SS Sequence:

ATACTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTAATCTTGATC

Flanking Amino Acid:

GPSHTKVNEQKPRSKLPLHG

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.2

66.2

39.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

83.5

0.75

0.8

81.2

35.6

Minor 5ss

42.4

-0.8

3.1

48.2

Minor BPS

64.9

0.45

1.2

70.53

34.8

Associated Gene:

Gene:

ANKS1A

Ensembl Gene ID:

ENSAPLG00000006934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027925

1498003 - 1594338

96336

ENSAPLT00000036280

1508140 - 1596566

88427

ENSAPLT00000028645

1498003 - 1594338

96336