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Intron Name: Anas_platyrhynchos_platyrhynchos_27_151822_152015_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

151822 - 152015

Intron Length:

194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CTCTGCTGACCG

Flanking Amino Acid:

TFKVRKEVFTVGCCIFAFVI

Intron Amino Acid Position:

498

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.2

31.9

Major BPS

66.3

0.4

1.1

41.8

Major PPT

0.67

0.8

31.1

Minor 5ss

33.9

-1.8

3.3

47.6

Minor BPS

44.6

-0.5

2.2

51.42

48.7

Associated Gene:

Gene:

SLC6A17

Ensembl Gene ID:

ENSAPLG00000015200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043647

142792 - 153819

11028

ENSAPLT00000015862

142792 - 153819

11028