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Intron Name: Anas_platyrhynchos_platyrhynchos_27_152176_152778_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152176 - 152778

Intron Length:

603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAA

U12 Branch Point Sequence:

TTTCCCTTGGCA

Flanking Amino Acid:

IAVAWIYGTKKFMQELTEML

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

76.2

39.3

Major BPS

65.4

0.38

1.4

75.9

36.3

Major PPT

79.7

0.67

0.9

76.8

31.7

Minor 5ss

38.4

-1.3

3.6

56.8

41.8

Minor BPS

49.5

-0

3.5

80.23

35.4

Associated Gene:

Gene:

SLC6A17

Ensembl Gene ID:

ENSAPLG00000015200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043647

142792 - 153819

11028

ENSAPLT00000015862

142792 - 153819

11028