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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1528219_1529491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1528219 - 1529491

Intron Length:

1273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TACCTCGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TTGCCGTAAACT

Flanking Amino Acid:

KSQHIAALIEDYTIGRKSAK

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

75.4

0.57

0.9

68.9

36.7

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

51.1

0.11

2.4

77.11

45.3

Associated Gene:

Gene:

ANKS1A

Ensembl Gene ID:

ENSAPLG00000006934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030894

1498003 - 1596566

98564

ENSAPLT00000028645

1498003 - 1594338

96336

ENSAPLT00000027925

1498003 - 1594338

96336

ENSAPLT00000007263

1498003 - 1596566

98564

ENSAPLT00000036280

1508140 - 1596566

88427