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Intron Name: Anas_platyrhynchos_platyrhynchos_27_152942_153335_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152942 - 153335

Intron Length:

394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCACA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACAAT

U12 Branch Point Sequence:

AATCCCTTGACA

Flanking Amino Acid:

PGYSAWIREEAAEKFLFYPT

Intron Amino Acid Position:

606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

76.7

33.9

Major BPS

57.4

0.18

1.3

65.4

Major PPT

86.3

0.82

0.7

84.1

23.9

Minor 5ss

34.2

-1.8

2.8

40.7

45.3

Minor BPS

73.9

0.75

1.2

75.72

34.5

Associated Gene:

Gene:

SLC6A17

Ensembl Gene ID:

ENSAPLG00000015200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043647

142792 - 153819

11028

ENSAPLT00000015862

142792 - 153819

11028