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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1529588_1529696_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1529588 - 1529696

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGCTTT

5'SS Class:

major

3'SS Sequence:

CTTGCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAT

U12 Branch Point Sequence:

TTTTCCTCTCTT

Flanking Amino Acid:

ATDPMCRIPQGDVEKAVTEL

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

69.7

43.7

Major BPS

61.1

0.28

1.2

52.7

43.2

Major PPT

77.6

0.62

0.8

Minor 5ss

47.9

-0.2

3.2

64.2

47.3

Minor BPS

42.9

-0.4

3.7

80.22

41.9

Associated Gene:

Gene:

ANKS1A

Ensembl Gene ID:

ENSAPLG00000006934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028645

1498003 - 1594338

96336

ENSAPLT00000027925

1498003 - 1594338

96336

ENSAPLT00000007263

1498003 - 1596566

98564

ENSAPLT00000036280

1508140 - 1596566

88427

ENSAPLT00000030894

1498003 - 1596566

98564