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Intron Name: Anas_platyrhynchos_platyrhynchos_27_15887_18009_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15887 - 18009

Intron Length:

2123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCTTCACCT

Flanking Amino Acid:

KIDFGEVARADDARQLFVLA

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.5

0.73

0.7

76.4

25.6

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

66.5

0.6

1.8

87.98

37.6

Associated Gene:

Gene:

GNAI3

Ensembl Gene ID:

ENSAPLG00000023137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025578

1975 - 29054

27080