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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1589294_1589764_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1589294 - 1589764

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTACCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TTTACGTGCACC

Flanking Amino Acid:

YSRVDRYKAQEERRESKLTL

Intron Amino Acid Position:

903

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

68.8

0.47

1.2

63.4

Major PPT

77.1

0.61

0.8

70.1

30.7

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

45.8

-0.3

2.5

43.3

Associated Gene:

Gene:

ANKS1A

Ensembl Gene ID:

ENSAPLG00000006934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027925

1498003 - 1594338

96336

ENSAPLT00000007263

1498003 - 1596566

98564

ENSAPLT00000036280

1508140 - 1596566

88427

ENSAPLT00000030894

1498003 - 1596566

98564

ENSAPLT00000028645

1498003 - 1594338

96336