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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1592200_1593456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1592200 - 1593456

Intron Length:

1257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTACGTATG

5'SS Class:

major

3'SS Sequence:

CCTTCATTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

CTCTCCTTCATT

Flanking Amino Acid:

KPRAGMRKSALEPPEVDQDS

Intron Amino Acid Position:

1161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

44.2

Major BPS

0.62

1.1

77.2

Major PPT

81.9

0.72

0.8

36.3

Minor 5ss

40.5

-1.1

56.3

Minor BPS

0.59

1.8

79.08

43.9

Associated Gene:

Gene:

ANKS1A

Ensembl Gene ID:

ENSAPLG00000006934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036280

1508140 - 1596566

88427

ENSAPLT00000027925

1498003 - 1594338

96336