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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1601322_1602797_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1601322 - 1602797

Intron Length:

1476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCCCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAA

U12 Branch Point Sequence:

TGCTCCCTACAG

Flanking Amino Acid:

DKSNTVWHVIEQRIHLFLSR

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

58.4

0.21

1.2

39.8

Major PPT

79.8

0.67

0.8

73.3

31.8

Minor 5ss

33.5

-1.9

41.5

39.2

Minor BPS

46.1

-0.4

2.1

54.15

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017630

1599673 - 1607649

7977

ENSAPLT00000006926

1600895 - 1607649

6755