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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1602962_1603437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1602962 - 1603437

Intron Length:

476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTGATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

CTTTGTGTGATT

Flanking Amino Acid:

KVLLEGLSCTRCEEALQDIS

Intron Amino Acid Position:

368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

80.1

30.7

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

68.4

0.41

66.6

44.3

Minor 5ss

-1.7

3.2

48.2

47.9

Minor BPS

-0.2

2.4

69.68

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017630

1599673 - 1607649

7977

ENSAPLT00000006926

1600895 - 1607649

6755