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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1605524_1606221_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1605524 - 1606221

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGCTGA

5'SS Class:

major

3'SS Sequence:

CTTCTTTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TTTGGATTAAAA

Flanking Amino Acid:

AIQLLQEIKEALLSLLLPRH

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.3

65.9

42.7

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

73.8

0.54

72.2

37.8

Minor 5ss

38.6

-1.3

2.9

48.1

47.4

Minor BPS

49.3

-0

2.2

69.75

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017630

1599673 - 1607649

7977

ENSAPLT00000006926

1600895 - 1607649

6755