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Intron Name: Anas_platyrhynchos_platyrhynchos_27_161144_163090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

161144 - 163090

Intron Length:

1947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GAAGGCTGAGCC

Flanking Amino Acid:

SYSWSRAFLVSHLCSPRPPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

77.1

0.61

0.7

69.1

31.4

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

40.8

-0.7

46.39

41.9

Associated Gene:

Gene:

KCNC4

Ensembl Gene ID:

ENSAPLG00000015421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019520

160976 - 186841

25866