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Intron Name: Anas_platyrhynchos_platyrhynchos_27_163838_170409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

163838 - 170409

Intron Length:

6572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCTCC

5'SS Class:

major

3'SS Sequence:

TTAACTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TGTGATTTAACT

Flanking Amino Acid:

EDPYSSKAARVVAFASLFFI

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

66.7

40.1

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

82.5

0.73

0.9

77.1

36.7

Minor 5ss

44.7

-0.6

2.8

52.1

44.7

Minor BPS

66.3

0.59

1.6

81.57

39.9

Associated Gene:

Gene:

KCNC4

Ensembl Gene ID:

ENSAPLG00000015421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016073

163091 - 178769

15679

ENSAPLT00000019520

160976 - 186841

25866