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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1646578_1646720_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1646578 - 1646720

Intron Length:

143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CCGCTGGGGACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTCCT

U12 Branch Point Sequence:

CCGCTGGGGACA

Flanking Amino Acid:

KLDFNKNLKEVMPTIEKLLS

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

71.6

40.1

Major BPS

30.5

-1.2

4.2

65.3

43.7

Major PPT

49.8

-0

1.1

44.1

41.3

Minor 5ss

32.4

-2

2.9

32.3

Minor BPS

31.8

-1.4

2.3

34.87

35.8

Associated Gene:

Gene:

SOX13

Ensembl Gene ID:

ENSAPLG00000016687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038622

1645431 - 1652221

6791