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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1646808_1647121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1646808 - 1647121

Intron Length:

314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGGTCC

5'SS Class:

major

3'SS Sequence:

TTCCCTGGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGACCCGCAGCC

Flanking Amino Acid:

RNAAETKEVKGTQESLAEKE

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

63.5

37.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

68.7

0.42

64.2

36.6

Minor 5ss

32.1

-2

3.2

41.8

Minor BPS

41.8

-0.6

2.3

54.35

42.8

Associated Gene:

Gene:

SOX13

Ensembl Gene ID:

ENSAPLG00000016687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038622

1645431 - 1652221

6791