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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1647295_1647702_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1647295 - 1647702

Intron Length:

408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCTCG

5'SS Class:

major

3'SS Sequence:

TCCCTCCTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

CGCGGCTCAGCC

Flanking Amino Acid:

MELARQQQEQIAKQQQQLIQ

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

59.3

42.4

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

71.5

0.48

0.9

64.9

36.4

Minor 5ss

37.3

-1.4

3.2

47.1

48.5

Minor BPS

38.9

-0.8

2.1

42.68

44.5

Associated Gene:

Gene:

SOX13

Ensembl Gene ID:

ENSAPLG00000016687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038622

1645431 - 1652221

6791