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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1648163_1648265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1648163 - 1648265

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCCC

5'SS Class:

major

3'SS Sequence:

TCCTCCGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATCAC

U12 Branch Point Sequence:

AGCACATCACCC

Flanking Amino Acid:

PGGSSHLQMQETSQPLNLTA

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.1

55.4

40.1

Major BPS

56.9

0.17

1.1

59.7

36.1

Major PPT

70.8

0.47

0.8

64.9

30.7

Minor 5ss

30.3

-2.3

3.5

42.7

44.4

Minor BPS

41.5

-0.6

48.07

Associated Gene:

Gene:

SOX13

Ensembl Gene ID:

ENSAPLG00000016687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038622

1645431 - 1652221

6791