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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1648753_1648836_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1648753 - 1648836

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCCGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTAACAT

U12 Branch Point Sequence:

CATCCCTGAGCC

Flanking Amino Acid:

EGALSHPYRKDHVGLDASPV

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

64.9

42.8

Major BPS

53.2

0.08

1.3

63.4

42.8

Major PPT

66.5

0.37

0.9

60.1

29.6

Minor 5ss

31.8

-2.1

37.6

47.1

Minor BPS

51.5

0.03

1.8

62.47

42.3

Associated Gene:

Gene:

SOX13

Ensembl Gene ID:

ENSAPLG00000016687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038622

1645431 - 1652221

6791