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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1648934_1649033_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1648934 - 1649033

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGGCAG

5'SS Class:

major

3'SS Sequence:

CTTTGCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCGCCCTGAGCC

Flanking Amino Acid:

DEALLSCEMDGSRHFPESRN

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.2

51.7

46.6

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

0.65

0.8

31.8

Minor 5ss

29.2

-2.4

3.5

38.2

46.8

Minor BPS

47.3

-0.2

1.8

52.56

44.6

Associated Gene:

Gene:

SOX13

Ensembl Gene ID:

ENSAPLG00000016687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038622

1645431 - 1652221

6791