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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1649178_1651363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1649178 - 1651363

Intron Length:

2186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CCCTCCTCACTT

Flanking Amino Acid:

MHNSSISKILGSRWKSMTNQ

Intron Amino Acid Position:

531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

72.4

0.56

73.5

32.5

Major PPT

72.9

0.52

0.9

65.5

40.5

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

1.9

63.16

47.6

Associated Gene:

Gene:

SOX13

Ensembl Gene ID:

ENSAPLG00000016687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038622

1645431 - 1652221

6791