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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1670988_1671255_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1670988 - 1671255

Intron Length:

268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TGCCCCTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

CCTCCCTCACCC

Flanking Amino Acid:

CKCSPLYSACVSHSRYDSSK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

72.6

38.9

Major BPS

0.85

0.9

39.9

Major PPT

70.5

0.46

0.8

61.4

Minor 5ss

29.4

-2.4

3.2

40.9

45.4

Minor BPS

49.1

-0

1.9

59.91

45.3

Associated Gene:

Gene:

REN

Ensembl Gene ID:

ENSAPLG00000012376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012902

1667395 - 1674485

7091