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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1671380_1671517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1671380 - 1671517

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGGCCC

5'SS Class:

major

3'SS Sequence:

CTGCTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CCCATGCTAACA

Flanking Amino Acid:

APTLLTNYLDTQYFGEISIG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

59.5

39.4

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

81.2

0.7

0.8

72.9

37.4

Minor 5ss

-2.4

3.3

38.9

39.4

Minor BPS

40.9

-0.7

2.2

47.43

Associated Gene:

Gene:

REN

Ensembl Gene ID:

ENSAPLG00000012376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012902

1667395 - 1674485

7091