Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_1697473_1697693_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1697473 - 1697693

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGAGCG

5'SS Class:

major

3'SS Sequence:

CCACGGCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

CGTGTCTCCACG

Flanking Amino Acid:

RPGADPPHPETREDRLGKHP

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.3

63.4

41.5

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

61.9

0.27

39.1

Minor 5ss

26.2

-2.7

31.1

42.5

Minor BPS

43.3

-0.6

2.1

47.31

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018816

1697011 - 1722201

25191