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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1698817_1699461_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1698817 - 1699461

Intron Length:

645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCGCGGGCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

GTTTCCTCCTCT

Flanking Amino Acid:

DNISRKHTFKDPPGQEVSAH

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

42.5

-0.4

1.7

37.5

39.8

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

42.1

-0.5

3.7

77.14

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018816

1697011 - 1722201

25191