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Intron Name: Anas_platyrhynchos_platyrhynchos_27_171347_172848_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

171347 - 172848

Intron Length:

1502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCC

5'SS Class:

strong_major

3'SS Sequence:

CACCCTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

TTGTCTGCCACC

Flanking Amino Acid:

EEGVAERKRSDSKQNGEANV

Intron Amino Acid Position:

530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

68.6

36.5

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

75.5

0.57

0.8

68.6

31.3

Minor 5ss

27.8

-2.5

2.9

34.2

41.4

Minor BPS

43.6

-0.5

2.5

61.79

44.2

Associated Gene:

Gene:

KCNC4

Ensembl Gene ID:

ENSAPLG00000015421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019520

160976 - 186841

25866

ENSAPLT00000016073

163091 - 178769

15679