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Intron Name: Anas_platyrhynchos_platyrhynchos_27_173035_178632_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173035 - 178632

Intron Length:

5598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCACAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

ATTTTCTTCACA

Flanking Amino Acid:

SCAADGGIQKGYGKSRSLSS

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

77.5

0.68

79.6

Major PPT

69.4

0.44

71.5

32.3

Minor 5ss

40.5

-1.1

3.3

55.3

48.9

Minor BPS

70.7

0.65

1.7

81.19

34.3

Associated Gene:

Gene:

KCNC4

Ensembl Gene ID:

ENSAPLG00000015421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016073

163091 - 178769

15679