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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1799546_1800399_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1799546 - 1800399

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCATC

5'SS Class:

strong_major

3'SS Sequence:

AATCACTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

TCTGCCTCAATC

Flanking Amino Acid:

DTDTEAAASEDCWQCTKCKK

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

76.2

39.9

Major BPS

64.5

0.36

65.2

28.2

Major PPT

72.1

0.5

0.9

39.2

Minor 5ss

42.5

-0.8

3.2

59.7

45.1

Minor BPS

62.5

0.37

1.7

70.19

41.8

Associated Gene:

Gene:

MDM4

Ensembl Gene ID:

ENSAPLG00000012694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013233

1787939 - 1801589

13651