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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1922155_1924560_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1922155 - 1924560

Intron Length:

2406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTAC

5'SS Class:

major

3'SS Sequence:

ATTTGCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

CCCTCCTCACCG

Flanking Amino Acid:

LVSAIEVPLDLPQPPTITKQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

73.1

31.9

Major BPS

72.5

0.56

1.2

39.9

Major PPT

83.8

0.76

0.8

77.6

36.1

Minor 5ss

43.1

-0.8

2.8

58.5

40.5

Minor BPS

47.8

-0.3

50.75

49.3

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006776

1921970 - 1959760

37791