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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1925075_1925413_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1925075 - 1925413

Intron Length:

339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTAGG

5'SS Class:

major

3'SS Sequence:

CTTCCCGTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

CCCTCCTCATGC

Flanking Amino Acid:

LSSKIHLQVSKSPLWPKEKV

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

62.8

43.3

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

68.3

0.41

61.2

40.1

Minor 5ss

31.9

-2.1

2.7

40.1

Minor BPS

-0.4

2.1

49.6

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039111

1921970 - 1959760

37791

ENSAPLT00000034519

1921970 - 1959760

37791

ENSAPLT00000018914

1921970 - 1959760

37791

ENSAPLT00000006776

1921970 - 1959760

37791

ENSAPLT00000040390

1921970 - 1959760

37791