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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1933105_1933304_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1933105 - 1933304

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTACGTACC

5'SS Class:

major

3'SS Sequence:

TCCCTCTCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTTAT

U12 Branch Point Sequence:

GTGCGTTTATCT

Flanking Amino Acid:

DLLLECIASGVPAPDIMWYK

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.2

62.9

41.8

Major BPS

0.47

1.2

61.1

45.5

Major PPT

74.1

0.54

0.7

72.9

25.3

Minor 5ss

37.9

-1.4

2.9

47.4

41.2

Minor BPS

47.6

-0.1

65.74

44.9

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018914

1921970 - 1959760

37791

ENSAPLT00000006776

1921970 - 1959760

37791

ENSAPLT00000040390

1921970 - 1959760

37791

ENSAPLT00000039111

1921970 - 1959760

37791

ENSAPLT00000034519

1921970 - 1959760

37791