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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1934339_1934864_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1934339 - 1934864

Intron Length:

526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

CTGGTGCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAG

U12 Branch Point Sequence:

CGTTCGGTAGCT

Flanking Amino Acid:

LLANAFVSVLDVPPRILAPR

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

68.7

37.6

Major BPS

54.7

0.12

1.7

57.1

49.4

Major PPT

72.7

0.51

65.3

41.1

Minor 5ss

32.1

-2

3.3

35.7

41.2

Minor BPS

43.4

-0.4

2.7

68.24

48.3

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018914

1921970 - 1959760

37791

ENSAPLT00000006776

1921970 - 1959760

37791

ENSAPLT00000040390

1921970 - 1959760

37791

ENSAPLT00000039111

1921970 - 1959760

37791

ENSAPLT00000034519

1921970 - 1959760

37791