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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1934977_1935074_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1934977 - 1935074

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCACG

5'SS Class:

strong_major

3'SS Sequence:

GTACGGCTGTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTACAA

U12 Branch Point Sequence:

CTGCCCTTACAA

Flanking Amino Acid:

FFGSPIPTLRWFKNGQGNTL

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

42.9

Major BPS

61.2

0.28

1.1

70.6

34.3

Major PPT

44.4

-0.3

1.7

46.6

45.7

Minor 5ss

39.8

-1.1

2.8

47.1

42.4

Minor BPS

51.9

0.06

1.8

61.87

44.1

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006776

1921970 - 1959760

37791

ENSAPLT00000040390

1921970 - 1959760

37791

ENSAPLT00000039111

1921970 - 1959760

37791

ENSAPLT00000034519

1921970 - 1959760

37791

ENSAPLT00000018914

1921970 - 1959760

37791