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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1937616_1938387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1937616 - 1938387

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCATC

5'SS Class:

strong_major

3'SS Sequence:

GCTGCGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCCAT

U12 Branch Point Sequence:

CCAGCCTCACCC

Flanking Amino Acid:

PANRLRDLPKERPDRPRDLE

Intron Amino Acid Position:

638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

78.1

36.6

Major BPS

52.1

0.05

1.2

62.1

35.8

Major PPT

62.5

0.28

0.9

36.6

Minor 5ss

-0.7

2.9

60.8

43.8

Minor BPS

45.4

-0.3

1.9

50.78

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018914

1921970 - 1959760

37791

ENSAPLT00000006776

1921970 - 1959760

37791

ENSAPLT00000040390

1921970 - 1959760

37791

ENSAPLT00000039111

1921970 - 1959760

37791