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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1938490_1938601_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1938490 - 1938601

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGAGGC

5'SS Class:

major

3'SS Sequence:

GTCCTCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGCCAC

U12 Branch Point Sequence:

TGCCTCGCCACC

Flanking Amino Acid:

PGDDNNSPITDYIVQFEEDR

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.3

64.7

40.8

Major BPS

45.9

-0.2

1.4

52.1

43.1

Major PPT

71.2

0.48

0.8

61.9

34.9

Minor 5ss

26.2

-2.7

3.1

33.7

41.7

Minor BPS

-0.9

2.3

41.8

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034519

1921970 - 1959760

37791

ENSAPLT00000018914

1921970 - 1959760

37791

ENSAPLT00000006776

1921970 - 1959760

37791

ENSAPLT00000040390

1921970 - 1959760

37791

ENSAPLT00000039111

1921970 - 1959760

37791